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− | '''Algal bloom dynamics'''
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− | Algal bloom is a short-lasting strong increase of an algal population. The concentration of [[algae]] multiplies a thousand or even a million fold and collapses shortly after. Algal blooms are a worldwide phenomenon that occurs when the water temperature is favorable and light and nutrients are sufficiently available. Due to [[eutrophication]] of the coastal waters, algal blooms have become more frequent. Global warming may also play a role. This article introduces some elementary notions that provide insight into the phenomenon of algal blooms. A simple model of algal bloom dynamics is presented in the appendix.
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− | ==Introduction==
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− | [[Image:meris_cover.png |300px|thumb|right| Fig. 1. Envisat MERIS true colour image of a phytoplankton bloom in the Barents Sea]]
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− | Algae are aquatic organisms that grow through [[photosynthesis]]. Many thousands of different algae species are known (Sournia et al., 1991<ref>Sournia, A., Chretiennot-Dinet, M.-J. and Ricard M. 1991. Marine phytoplankton: how many species in the world ocean? Journal of Plankton Research 13: 1093–1099</ref>; Andersen, 1992<ref>Andersen, R.A. 1992. Diversity of eukaryotic algae. Biodiversity and Conservation 1: 267-292</ref>). In this article we focus on micro-algae, collectively called '[[phytoplankton]]'. This includes also certain types of bacteria in marine waters (sometimes called 'bacterioplankton') that grow through photosynthesis and produce blooms, although not belonging to the algae family. The most common phytoplankton species in seawater are diatoms, flagellates and cyanobacteria. The smallest species (picophytoplankton, size < 2 micron, consisting mostly of cyanobacteria) have the highest nutrient-uptake efficiency and are therefore most abundant in nutrient-poor ocean waters, whereas the larger diatoms tend to dominate the phytoplanktonic biomass in nutrient-rich waters (Edwards et al., 2011<ref>Edwards, K. F., Klausmeier, C. A. and Litchman, E. 2011. Evidence for a three-way trade-off between nitrogen and phosphorus competitive abilities and cell size in phytoplankton. Ecology 92: 2085–2095</ref>; Burson et al., 2018<ref>Burson, A., Stomp, M., Greenwell, E., Grosse, J. and Huisman, J. 2018. Competition for nutrients and light: testing advances in resource competition with a natural phytoplankton community. Ecology 99: 1108–1118</ref>). Blooms of large phytoplankton species only occur when the temperature does not exceed a critical limit of about 15<sup>o</sup>C (Cloern, 2018<ref>Cloern, J.E. 2018. Why large cells dominate estuarine phytoplankton. Limnology and Oceanography 63: 392-409</ref>). Algae blooms can extend over large areas, as illustrated in Fig. 1.
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− | All phytoplankton species grow by absorbing dissolved CO<sub>2</sub> under the influence of light and thereby emit oxygen. Marine phytoplankton contributes almost half to the total oxygen production on Earth (Behrenfeld et al., 1998<ref>Field, C. B., Behrenfeld, M. J., Randerson, J. T. and Falkowski, P. 1998. Primary production of the biosphere: integrating terrestrial and oceanic components. Science 281: 237–240</ref>). Phytoplankton species are called [[Autotrophic|'autotrophs']] or [[Primary production|'primary producers']], because they are able to feed and produce organic material from mineral substances. They are a food source for other marine organisms, [[zooplankton]] in the first place. However, the distinction between phytoplankton and zooplankton is often not clear, as many species belonging to these plankton groups are 'mixotrophs': they are phototrophic but can also ingest particulate or dissolved organic matter (Flynn et al., 2013<ref>Flynn, K.J., Stoecker, D.K., Mitra, A., Raven, J.A., Glibert, P.M., Hansen, P.J., Graneli, E. and Burkholder, J.M., 2013. Misuse of the phytoplankton-zooplankton dichotomy: the need to assign organisms as mixotrophs within plankton functional types. J. Plankton Res. 35: 3–11</ref>). For more details about the different plankton species, see the article [[Marine Plankton]].
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− | ==Conditions for growth: light, temperature and nutrients==
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− | Besides CO<sub>2</sub> and sunlight, phytoplankton needs certain nutrients for growth. These are primarily the minerals nitrogen N, phosphorus P and silicon Si (mainly in the form of dissolved salts, nitrate, phosphate and silicate, respectively, see [[Continental Nutrient Sources and Nutrient Transformation]]). Small amounts of iron Fe and certain vitamins are also required. Lack of any of these nutrients limits the growth of phytoplankton. Nutrient concentrations in the ocean are generally so low that phytoplankton species in the ocean are in fierce competition to exploit these scarce resources. The ratio in which the primary nutrients are needed has been determined in the past at 106 C: 16 N: 1 P, the so-called [[Redfield ratio]]. However, the ratio varies by species<ref>Davidson, K., Gowen, R.J., Tett, P., Bresnan, E., Harrison, P.J., McKinney, A., Milligan, S., Mills, D.K., Silke, J. and Crooks, A.M. 2012. Harmful algal blooms: How strong is the evidence that nutrient ratios and forms influence their occurrence? Estuar. Coast. Shelf Sci. 115: 399–413</ref>, allowing some species to grow better or less well than others under certain conditions. Growth further depends critically on light and temperature (Bissinger et al., 2008<ref> Bissinger, J. E., Montagnes, D. J. S., Sharples, J., and Atkinson, D. 2008. Predicting marine phytoplankton maximum growth rates from temperature: improving on the Eppley curve using quantile regression. Limnol. Oceanogr. 53: 487–493. doi: 10.4319/lo.2008.53.2.0487</ref>; Boyd et al., 2013<ref>Boyd, P.W., Rynearson, T.A,. Armstrong, E.A., Fu, F., Hayashi, K., et al., 2013. Marine Phytoplankton Temperature versus Growth Responses from Polar to Tropical Waters – Outcome of a Scientific Community-Wide Study. PLoS ONE 8(5): e63091. doi:10.1371/journal.pone.0063091</ref>). Here too, the optimum values are specific to each algal species.
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− | [[Image:AlgaeBloomTerschelling.jpg|thumb|450px|right|Fig. 2. Multi-annual observation record of the alga ''Chaetoceros socialis'' (red spikes) at a measuring point in the North Sea 10 km north of the Dutch Wadden island of Terschelling. Simultaneous measurements of the local nitrate concentration (black) and surface salinity (blue). From Wagner-Cremer et al. (2018)<ref>Wagner-Cremer, F., Steur, F. van Wezel, R., Verweij, G. and Kouwets, F. 2018. Wat momentopnamen van fytoplankton ons kunnen vertellen over de geschiedenis van de kust. H2O-Online / 19 januari 2018</ref>.]]
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− | Phytoplankton can grow under favorable conditions unrestrained as long as there is no restriction in the availability of the necessary nutrients. Population growth occurs through division of the parent cell, with the formation of two or more offspring. The cell division frequency for each species is different and depends on temperature and light; it can happen every few hours, but also every few days. Since this applies to each individual in the population, growth has an exponential character. Huge population growth is therefore possible in a short time.
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− | An example of the explosive short-lived nature of algal blooms is illustrated in Fig. 2, showing a multi-year observation record of the alga ''Chaetoceros socialis'' at a measuring station in the North Sea 10 km north of the Dutch Wadden island of Terschelling. The figure also shows observations of the nitrogen concentration (dissolved nitrate) and the salinity at the measuring point.
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− | The conditions for algal blooms vary with the seasons. This is not only due to temperature and light. In the winter, nutrient-rich organic material is stirred from the seabed. Therefore, nutrient concentrations are often highest in early spring (N hemisphere). With increasing light and temperature, the conditions for algal bloom become optimal; the largest algal blooms therefore occur in general during springtime. The strongest algal growth takes place in the upper water layer where light penetrates best, the so-called euphotic zone. Intensive mixing over the water column is less favorable because it moves part of the phytoplankton into deeper water layers, where growth is limited due to a lack of light. In the oceans, algal blooms are typically concentrated in a rather thin surface layer. Vertical mixing is counteracted by density stratification, whereby water with a higher temperature and/or lower salinity floats on top of colder/saltier seawater. Organic detritus, because of its specific density, tends to be collected at the interface zone (picnocline), where nutrients are released after mineralization of the detritus. This creates ideal conditions for the development of strong algal blooms, especially blooms of mixotrophic algae that feed both on nutrients and organic material (Berdalet et al., 2014<ref name=Ber>Berdalet, E.,McManus, M.A., Ross, O.N., Burchard, H., Chavez, F.P., Jaffe, J.S., Jenkinson, I.R., Kudela, R., Lips, I., Lips, U., Lucas, A., Rivas, D., Ruiz-delaTorre, M.C., Ryan, J., Sullivan, J.M.k and Yamazakim H. 2014. Understanding harmful algae in stratified systems: Review of progress and future directions. Deep-Sea Research II 101: 4–20</ref>; Sigman and Hain, 2012<ref>Sigman, D. M. and Hain, M. P. 2012. The Biological Productivity of the Ocean. Nature Education Knowledge 3: 21 https://www.nature.com/scitable/knowledge/library/the-biological-productivity-of-the-ocean-70631104/</ref>). The expected future changes in ocean conditions (increase in temperature, stratification, eutrophication and acidity) can be beneficial for mixotrophic phytoplankton and unfavorable to diatoms (Glibert, 2020<ref name=Gli>Glibert, P.M. 2020. Harmful algae at the complex nexus of eutrophication and climate change. Harmful Algae 91, 101583</ref>). Measurements further show that when the seawater temperature increases, the biomass and productivity of phytoplankton decreases, while a shift takes place from larger phytoplankton species (haptophytes) to smaller species (cyanobacteria) (Van de Poll, 2013<ref> Van de Poll, W.H., Kulk, G., Timmermans, K.R., Brussaard, C.P.D., van der Woerd, H.J., Kehoe, M.J., Mojica, K.D.A., Visser, R.J.W., Rozema, P.D. and Buma, A.G.J., 2013. Phytoplankton chlorophyll a biomass, composition, and productivity along a temperature and stratification gradient in the Northeast Atlantic Ocean. Biogeosciences 10: 4227–4240</ref>).
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− | The size of a plankton bloom is generally expressed in terms of organic carbon weight, <math>g \, C</math>. The value can be obtained by taking samples and measuring the ash-free dry biomass content (see [[In situ monitoring of eutrophication]], [[Sampling tools for the marine environment]]). However, it is most usual to estimate phytoplankton biomass by quantifying chlorophyll a, the photosynthetic pigment common to all types of algae. It can be determined by various optical techniques due to its [[fluorescence]] properties. Techniques are described in the articles [[Estimation of spatial distribution of phytoplankton in the North Sea]], [[Determining coastal water constituents from space]], [[Differentiation of major algal groups by optical absorption signatures]]. A limitation of remote sensing is that only surface blooms are observed whereas below-surface blooms my also occur (Blondeau-Patissier et al., 2014<ref>, D., Gower, J.F.R., Dekker, A.G., Phinn, S.R. and Brando, V.E. 2014. A review of ocean color remote sensing methods and statistical techniques for the detection, mapping and analysis of phytoplankton blooms in coastal and open oceans. Progress in Oceanography 123: 123–144</ref>).
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− | ==Other factors that condition algal blooms==
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− | ===Inter-species competition===
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− | The conditions for optimal growth are not the same for different algal species present in a particular coastal area. The species that uses the available resources with the highest efficiency will experience the strongest growth. Therefore, the dynamics of algal blooms cannot be estimated from the average reproduction rate of the various algae species. A common assumption is that the composition of the algal population adapts rapidly, so that optimal use is made of the growth potential provided by the available resources: light, temperature and nutrients (Glibert, 2017<ref name=Gli>Glibert, P.M. 2017. Eutrophication, harmful algae and biodiversity - challenging paradigms in a world of complex nutrient changes. Mar. Poll. Bull. 124: 591–606</ref>). For example, field observations by Philippart et al. (2007<ref name=Ph>Philippart, C.J.M., Beukema, J.J., Cadée, G.C., Dekker, R., Goedhart, P.W., van Iperen, J.M., Leopold, M.F. and Herman, P.M.J. 2007. Impacts of nutrient reduction on coastal communities. Ecosystems 10: 95-118</ref>) in the eutrophic Wadden Sea show that the composition of the algal population changes according to the ratio between different nutrients. In this study, as well as in the tropical Godavari estuary (Bharathia et al. 2018<ref>Bharathia, M.D., Sarmaa, V.V.S.S. and Ramaneswaric, K. 2018. Intra-annual variations in phytoplankton biomass and its composition in the tropical estuary: Influence of river discharge. Marine Pollution Bulletin 129: 14–25</ref>), it was observed that large phytoplankton species (diatoms) are favoured when N/P ratios are relatively low, whereas high N/P ratios are beneficial for small species (flagellates, cyanobacteria). The composition of the phytoplankton population further depends on many other factors. Diatoms require sufficient dissolved Si and have a growth optimum at lower temperatures than many cyanobacterial and dinoflagellates species (Anderson, 2000<ref>Anderson, N.J. 2000. Diatoms, temperature and climate change. Eur. J. Phycol. 35: 307–314</ref>). The form in which N is present (nitrate or ammonia) also plays a role<ref name=Gli/>; diatoms prefer nitrate (NO<sub>3</sub><sup>-</sup>) whereas flagellates and cyanobacteria prefer ammonia (NH<sub>3</sub>).
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− | In a modelling approach based on light, temperature and nutrient dependent growth rates for different phytoplankton species, the composition of the phytoplankton population (numbers of constituent species) is determined by optimizing at each time step the utilization of the available resources (light and nutrients). The utilization of these resources during this time step yields the new available light and nutrients for which the composition of the phytoplankton population is optimized in the next time step. These models assume that the population is always tuned to optimum resource utilization at each time step, compatible with maximum growth rates. Numerical simulations by Los and Wijsman (2007<ref>Los, F.J. and Wijsman, J.M.W. 2007. Application of a validated primary production model (BLOOM) as a screening tool for marine, coastal and transitional waters. Journal of Marine Systems 64: 201-215</ref>) of algal blooms based on this assumption generally show fair similarity to field observations.
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− | Another factor influencing the competition between phytoplankton species for light and nutrients is the ability of certain algal species to migrate towards zones that offer the best growth conditions. In this way these algae can outcompete non-motile species, especially in low-turbulence environments (Klausmeier and Litchman, 2001<ref>Klausmeier, C.A. and Litchman, E. 2001. Algal games: The vertical distribution of phytoplankton in poorly mixed water columns. Limnol. Oceanogr. 46: 1998–2007</ref>).
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− | ===Predation===
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− | The size of algal populations is limited not only by shortage of nutrients, but also by mortality and predation. Algae are an essential food source for many organisms in the sea. The main phytoplankton grazers are zooplankton and mixotrophic species, which come in different shapes and sizes. The smallest zooplankton (micro-zooplankton, mainly flagellates, ciliates and mixotrophic phytoplankton), while grazing on the smallest phytoplankton species, can adapt quickly to changes in the prey population and thus largely controls the size of picophytoplankton blooms. This is less the case for the larger zooplankton, that consists mainly of herbivore copepods in the oceans and of filter feeding benthos and [[benthic]] larvae in estuarine environments. Blooms of larger phytoplankton species (diatoms, dinoflagellates), that dominate in eutrophic and nitrogen-controlled conditions<ref name=Ph></ref>, are therefore less sensitive to grazer dynamics. The lesser grazing sensitivity can also be due to flight behavior (Harvey and Mende-Deuer, 2012<ref>Harvey, E.L. and Menden-Deuer, S. 2012. Predator-Induced Fleeing Behaviors in Phytoplankton: A New Mechanism for Harmful Algal Bloom Formation? PLoS ONE 7(9): e46438. https://doi.org/10.1371/journal.pone.0046438</ref>) or a lower nutrient content of larger phytoplankton (Branco et al., 2020<ref>Branco,P., Egas, M., Hall, S.R. and Huisman, J. 2020. Why Do Phytoplankton Evolve Large Size in Response to Grazing? The American Naturalist vol. 195 , no. 1</ref>). Digestion of phytoplankton by large zooplankton species leads to excretion of organic material in the form of fecal pellets. In the deep ocean, fecal pellets sink to the bottom; in this way CO<sub>2</sub> and nutrients are removed from the marine ecosystem. In shallow coastal waters, fecal pellets are mineralized on the bottom where the released nutrients are exploited by the [[benthic]] ecosystem. Organic bottom material that is stirred up by waves and currents provides nutrients to the [[pelagic]] phytoplankton. Organic matter and nutrients are stored in the soil in areas where net sedimentation occurs, but otherwise the recycling of nutrients in coastal waters is stronger than in the ocean.
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− | ===Mortality===
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− | Phytoplankton mortality is largely due to viral infections (Baudoux, 2007<ref>Baudoux, A-C. 2007. The role of viruses in marine phytoplankton mortality. Thesis Groningen University, 148 pp</ref>). In the (sub)tropical ocean, the contribution of viruses to the decay of algal blooms is similar or even superior to the impact of grazing, whereas grazing dominates at higher latitudes (Mojica et al., 2016<ref> Mojica, K.D.A., Huisman, J., Wilhelm, S.W. and Brussaard, C.P.D. 2016. Latitudinal variation in virus-induced mortality of phytoplankton across the North Atlantic Ocean. The ISME Journal 10: 500–513; doi:10.1038/ismej.2015.130</ref>). The mortality rate of phytoplankton exceeds in some cases the growth rate, but is generally lower. Most dead algae are too small to sink to the bottom. Part of the dead algae is broken down by bacteria in the euphotic zone, where the released nutrients fuel new blooms. Another part aggregates with other organic and inorganic particles until reaching a mass that makes the aggregates sink to the bottom. In the oceans, these sinking aggregates (called 'marine snow') are sequestered in deep water layers. In addition to gravitational sinking, downward transport of organic matter in the ocean also occurs in downwelling regions (see the article [[Shelf sea exchange with the ocean]]) and through episodic localized subduction currents (Llort et al., 2018<ref>Llort, J., Langlais, C., Matear, R., Moreau, S., Lenton, A. and Strutton, P. G. 2018. Evaluating Southern Ocean Carbon Eddy-Pump From Biogeochemical-Argo Floats. Journal of Geophysical Research Oceans 123: 971–984</ref>). The total ocean carbon sink due to these different processes is in the order of ¼ of the total global carbon emissions (De Vries et al., 2019<ref>DeVries, T., Le Querec, C., Andrew, O., Berthet, S., Hauck, J., Ilyina, T., Landschutzer, P., Lenton, A., Lima, A.D., Nowicki, M., Schwinger, J. and Seferian, R. 2019. Decadal trends in the ocean carbon sink. PNAS 116: 11646–11651</ref>).
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− | ==Consequences of algal blooms==
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− | ===Increased fishery yields===
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− | There is ample evidence that eutrophication of coastal waters has led to an increase in primary production and an increase in the food supply for higher [[Trophic level|trophic]] species. Although there is no one-one correspondence between the biomasses of different trophic levels, a strong increase in fishing yields in eutrophicated coastal waters can be attributed to this increased primary production (Nixon, 1988<ref>Nixon, S. W. 1988. Physical energy inputs and the comparative ecology of lake and marine ecosystems. Limnol. Oceanogr. 33: 1005–1025</ref>; Nixon and Buckley, 2002<ref>Nixon, S.W. and Buckley, B. A. 2002. “A strikingly rich zone” – Nutrient enrichment and secondary production in coastal marine ecosystems. Estuaries 25: 782–796</ref>).
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− | ===Oxygen depletion===
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− | Algal blooms operate by photosynthesis and therefore produce a lot of oxygen. The reverse happens when the bloom decays; oxygen is extracted from the water when the organic material is mineralized (the work of bacteria). The oxygen demand of a collapsing algal bloom can be very high. Dissolved oxygen will be depleted if the water is not flushed or aerated fast enough, a situation called anoxia. This is a common phenomenon in lakes and microtidal seas, but it can also occur in lagoons and estuaries. In cases where differences in temperature or salinity between upper and lower water layers stratify the water column, anoxia can easily arise in the lower water layer (see [[Estuarine turbidity maximum]]). This is on the one hand due to mineralization of sinking organic material, and on the other hand due to suppression of turbulent mixing with water of the more aerated and oxygen-rich top layer. Most organisms cannot live in anoxic water and die, and thus aggravate anoxia. Oxygen depletion is often an indirect result of eutrophication, that stimulates the formation of algal blooms in the upper water layer.
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− | ===Harmful algae===
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− | Numerous algae species (a few hundred of the many thousands of species) produce toxic substances and are therefore called harmful algae. Many aquatic (and non-aquatic) organisms are poisoned when they ingest large amounts of these toxic algae. This can happen when a bloom of harmful algae develops. Marine aquaculture is particularly affected by toxic algal blooms; consumers are poisoned by toxins that are bio-concentrated in exposed fish and shellfish (which are not affected themselves). Harmful algal blooms (HABs) are a natural and frequent phenomenon, similar to non-harmful algal blooms (Smayda, 1997<ref>Smayda T.J. 1997. Harmful algal blooms: their ecophysiology and general relevance to phytoplankton blooms in the sea. Limnology and Oceanography 42: 1137–1153</ref>). The chemicals produced by harmful algae (e.g. certain species of diatoms and dinoflagellates) are thought to be a defence mechanism against predators, either through toxin production or feeding deterrence, see [[Chemical ecology#Chemical ecology and phytoplankton|Chemical ecology and phytoplankton]] and [[Functional metabolites in phytoplankton]]. However, some doubts exist about the effectiveness of these defence mechanisms to reduce grazing pressure by zooplankton (Zigone and Wyatt, 2004<ref name=Z> Zingone, A., Wyatt, T. 2004. Harmful algal blooms: keys to the understanding of the phytoplankton ecology. In: Robinson, A.R., McCarthy, J. and Rothschild, B.J. (eds.) The Sea. Harvard University Press, Harvard, pp 867-926 </ref>). There is some evidence that the size and frequency of harmful algal blooms are increasing (Hallegraeff, 1993<ref>Hallegraeff, G. M. 1993. A review of harmful algal blooms and their apparent global increase. Phycologia 32: 79–99</ref>). Some theories relate the increase in toxic algal blooms to eutrophication, in particular in situations where the natural nutrient ratio is disturbed; other theories point to enhanced stratification, acidity and global warming (Glibert, 2020<ref name=Gli/>). However, a clear explanation of the causes is still lacking (Anderson, 2012<ref>Anderson, D. 2012. HABs in a changing world: a perspective on harmful algal blooms, their impacts, and research and management in a dynamic era of climactic and environmental change. Harmful Algae 2012 (2012). 2014 ; 2012: 3–17 PMID: 26640829; PMCID: PMC4667985</ref>; Berdalet et al., 2016<ref> Berdalet, E., Fleming, L.E., Gowen, R., Davidson, K., Hess, P., Backer, L.C., Moore, S.K., Hoagland, P. and Enevoldsen, H. 2016. Marine harmful algal blooms, human health and wellbeing: challenges and opportunities in the 21st century. J. Mar. Biol. Assoc. U.K. 96: 61–91</ref>; Wells et al., 2020<ref> Wells, M.L., Karlson, B., Wulff, A., Kudela, R., Trick, C., Asnaghi, V., Berdalet, E., Cochlan, W.,. Davidson, K., De Rijcke, M., Dutkiewicz, S., Hallegraeff, G., Flynn, K.J., Legrand, C., Paerl, H., Slke, J., Suikkanen, S., Thompson, P. and Trainer, V.L. 2020. Future HAB science: Directions and challenges in a changing climate. Harmful Algae 91, 101632</ref>).
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− | ==Regional distribution of algal blooms==
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− | Algal blooms require light and nutrient-rich water. Nutrient-rich surface waters occur naturally in the so-called upwelling zones, areas where deep ocean water rises up (see the articles [[Ocean circulation]] and [[Shelf sea exchange with the ocean]]). Major upwelling zones are located along the Atlantic coast of Africa and the Pacific coasts of California and south America, where ocean surface currents are bent off the coast by the effect of Earth's rotation. Net primary productivity NPP (gross production minus respiration) can exceed 1000 <math>g \, C m^{-2} y^{-1}</math>, which is much more than the ocean average of about 150 <math>g \, C m^{-2} y^{-1}</math>. However, the highest nutrient concentrations are not found in the oceans, but in coastal waters, especially in estuaries and lagoons (Howarth, 1988<ref> Howarth, R.W. 1988. Nutrient limitation of net primary production in marine ecosystems, Annual Rev. Ecol. Syst. 19: 89–110 </ref>), mainly due to release of nutrients by human activities (see e.g. [[Eutrophication in coastal environments]]). Most of the primary production occurs during seasonal or episodic algal blooms. However, the annual NPP in coastal systems is not exceptionally high; values range typically from 50 to 400 <math>g \, C m^{-2} y^{-1}</math>. Large spatial differences occur within estuaries as well as strong interannual fluctuations, but on average the NPP seldom exceeds 500 <math>g \, C m^{-2} y^{-1}</math> (Cloern et al., 2014<ref> Cloern, J.E., Foster, S.Q. and Kleckner, A.E. 2014. Phytoplankton primary production in the world's estuarine -coastal ecosystems. Biogeosciences 11: 2477–2501 </ref>). A major reason is the greater importance of light as a limiting factor for algal growth than nutrient deficiency, especially in deep (often dredged) estuaries. This is due to the turbidity of the water in estuaries and lagoons and along the adjacent coast (see the articles [[Estuarine turbidity maximum]] and [[Which resource limits coastal phytoplankton growth/ abundance: underwater light or nutrients?]]). A model study by Liu et al. (2018<ref>Liu, B., de Swart, H. E. and de Jonge, V. N. 2018. Phytoplankton bloom dynamics in turbid, well-mixed estuaries: a model study. Estuarine, Coastal and Shelf Science. 211: 137-151</ref>) shows that in well-mixed turbid estuaries, algal blooms are restricted to the zone downstream from the [[estuarine turbidity maximum]]. The role of river discharge on algal blooms in estuaries is ambiguous. High discharges supply nutrients, but they also flush algae out of the estuary. Observations by McSweeney et al. (2016<ref>McSweeney, J. M., Chant, R. J., Wilkin, J. L. and Sommerfield, C. K. 2016. Suspended sediment impacts on light-limited productivity in the Delaware estuary. Estuaries and Coasts 40: 977–993</ref>) in the Delaware show that high river discharges generate stratification with favorable light conditions for algal blooms in the surface layer. In estuaries with large intertidal flats, [[pelagic]] algae have to compete for nutrients with [[benthic]] algae (De Jonge and van Beusekom, 1992<ref>De Jonge, V. N. and van Beusekom, J. E. E., 1992. Contribution of resuspended microphytobenthos to total phytoplankton in the Ems estuary and its possible role for grazers. Netherlands Journal of Sea Research 30: 91–105</ref>). Comparing observations from many estuaries, it appears that the total annual decay of organic matter in most estuaries is larger than the gross primary production. This means that, unlike other marine systems, these estuaries are net producers of CO<sub>2</sub> (Caffrey, 2004<ref>Caffrey, J. M. 2004. Factors controlling net ecosystem metabolism in US estuaries. Estuaries 27: 90–101</ref>; Gattuso et al., 1998<ref>Gattuso, J.-P., Frankignoulle, M., and Wollast, R. 1998. Carbon and carbonate metabolism in coastal aquatic ecosystems. Annual Rev. Ecol. Syst. 29: 405–433</ref>).
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− | ==Appendix==
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− | The occurrence of algal blooms, with rapid emergence and equally rapid disappearance, is a prominent feature of eutrophication. This appendix provides a qualitative explanation of algal bloom dynamics, following the paper by Huppert et al. (2002<ref name =HBS>Huppert, A., Blasius, B. and Stone, L. 2002. A Model of Phytoplankton Blooms. The American Naturalist 159: 156-171</ref>). The explanation is based on a simple model in which an algal bloom is related to the available amount of a certain nutrient. This nutrient is assumed to be essential for the growth of the algal population, but to be present in such a low concentration that it limits the growth of the population. Because the uptake of the nutrient by the algae decreases the nutrient concentration, the population growth and the nutrient concentration form together a self-regulating feedback system. The different processes that play a role are set out below. The model is meant to enable a better understanding of the algal bloom process; it is too simple for application to real field situations because many of the processes discussed previously are ignored.
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− | We call <math>P(t)</math> the biomass, representing the size of the algal population at time <math>t</math> in a certain volume <math>V</math> of the sea, and <math>N(t)</math> the average nutrient concentration in this volume. The temporal variation of the algal biomass, <math>dP/dt</math> and the nutrient concentration, <math>dN/dt</math>, is regulated by the following factors:
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− | * Nutrient uptake <math>B</math>. The uptake depends on the algal biomass <math>P</math> and on the nutrient concentration <math>N</math>. If the nutrient concentration is low (limiting), linearity of the dependence in both <math>P</math> and <math>N</math> is a reasonable assumption, <math>B=\beta (t) \, P \, N</math>. The uptake efficiency <math>\beta(t)</math> depends on other environmental conditions for algal growth, in particular temperature and light. Nutrient uptake increases the algal biomass by <math>B_P=\beta_P(t) \, P \, N</math> and decreases the nutrient concentration by <math>B_N=-\beta_N(t) \, P \, N</math>. The ratio <math>\rho=\beta_N(t)/\beta_P(t)</math> is constant. Saturation of the nutrient uptake (i.e. <math>B</math> independent of <math>N</math> when <math>N</math> is abundant) is ignored.
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− | * Biomass decay with nutrient restitution <math>G</math>. The algal biomass decreases by respiration, mortality and mineralization of algal detritus, <math>G_P = - \gamma (t) \, P</math>, while the nutrient concentration increases with restitution of nutrient by <math>G_N=\rho \gamma (t) \, P</math>. It is assumed that respiration and mineralization are quasi-instantaneous processes; their efficiency for nutrient restitution is expressed by the rate factor <math>\gamma(t)</math>.
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− | * Nutrient loss <math>S</math> related to the loss of algal biomass by predation, sinking to the bottom and export, and therefore assumed proportional to the algal biomass: <math>S=- \sigma (t) \, P</math>. Predation by zooplankton depends not only on the algal biomass but also on the biomass of zooplankton. The zooplankton population itself depends on the algal biomass and increases when the algal biomass is high. However, zooplankton dynamics is ignored in the model.
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− | * Nutrient loss <math>A=-\alpha (t) \, N</math>, as a result of biogeochemical processes that limit the availability of nutrients for uptake by algae.
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− | * Nutrient supply from external sources, <math>Q</math>. Major external nutrient supplies (partly in the form of organic material) are coming from rivers, atmospheric deposition and stirring up of organic bed material.
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− | We focus on the period in which the algal population experiences rapid growth and rapid decline. This period is assumed so short that the factors <math>\alpha, \beta, \gamma, \sigma</math> can be considered approximately constant. Collecting the expressions of the factors influencing the temporal variation of algal population, <math>dP/dt</math> and the nutrient concentration, <math>dN/dt</math>, we arrive at the equations:
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− | <math>dP/dt = B_P+G_P+S_P = (\beta \, N - \gamma - \sigma ) \, P , \qquad (A1)</math>
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− | <math>dN/dt = B_N +G_N + A + Q = \rho (\gamma - \beta \, N) \, P - \alpha \, N + Q . \qquad (A2)</math>
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− | These coupled nonlinear equations are known as the Lotka-Volterra equations. The solution is not straightforward. It depends not only on the coefficients appearing in the equations but also on the initial conditions <math>P=P_0, \, N=N_0</math> at time <math>t=0</math>. Different types of long-term behavior of <math>P</math> and <math>N</math> may result: convergence to a static equilibrium state, to a cyclic state or to a state of chaotic fluctuations around certain attractors. We will not consider the long-term behavior, especially because the assumption of constant coefficients does not hold. For a qualitative understanding of the short-term behavior we will first consider the equilibrium solution of the Eqs. (A1) and (A2) corresponding to <math>dP/dt=0</math> and <math>dN/dt</math>. The equilibrium solution is given by the curves
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− | <math>N_{eq}=\large\frac{\gamma + \sigma}{\beta}\normalsize, \quad P_{eq}=\large\frac{Q -\alpha N}{\rho (\beta N - \gamma)}\normalsize. \qquad (A3)</math>
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− | These curves are drawn in Fig. 3. The curves cut the <math>P,N</math> phase plane in 4 phase sectors:
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− | * Green phase: <math>P</math> and <math>N</math> both increase;
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− | * Yellow phase: <math>P</math> increases, <math>N</math> decreases;
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− | * Red phase: <math>P</math> and <math>N</math> both decrease;
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− | * Blue phase: <math>P</math> decreases and <math>N</math> increases.
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− | {| border="0"
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− | [[File:AlgaeBloomPhasePlane.jpg|thumb|520px|left|Fig. 3. Solution of the Lotka-Volterra equations (A1, A2), showing the coupled evolution of <math>P(t)</math> and<math>N(t)</math> in the <math>N-P</math> phase plane (solid line). The model parameters are set as follows: <math>\alpha=0, \, \beta=0.1/N_0/day, \, \rho=10^{-3}, \, \gamma=0, \, \sigma=0.1/day, \, Q=7.5 \, 10^{-3} N_0/day, </math> <math>N_0=0.1 g/m^3, P_0=6.10^{-5} g/m^3</math>. From Huppert et al. (2002)<ref name =HBS></ref>.]]
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− | [[File:AlgaeBloomModel.jpg|thumb|left|400px|Fig. 4. Temporal evolution of the algal population <math>P(t)</math> (solid line) and the nutrient concentration <math>N(t)</math> (dashed line) according to the equations (A1, A2) with the same parameters as for Fig. 3. ]]
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− | Now consider the evolution graph in Fig. 3, which is obtained by numerical integration of the Eqs. (A1) and (A2) <ref name =HBS></ref>. The bloom starts in the green phase sector, where initially the algal biomass <math> P </math> is very small. The environmental conditions (temperature, light) have just become favorable for nutrient uptake, i.e. the uptake efficiency factor <math>\beta </math> has increased significantly. Shortly before (not shown in the figure), <math>\beta </math> was much smaller and <math>N_ {eq} </math> much larger, so that the algal population was still in the blue phase (i.e. decreasing in size). Due to the increased uptake efficiency, the biomass <math>P</math> is now increasing, but the increase is slow because the rate of increase is proportional to <math>P</math> (cf. A1). Nutrient uptake is still quite low and the nutrient concentration is still increasing due to the supply <math>Q</math>. However, with increasing population size <math>P</math> the nutrient uptake also increases and at some moment the nutrient concentration <math>N</math> changes from increasing to decreasing. The <math>P-N</math> system enters the yellow phase, where <math>P</math> will grow rapidly, because the rate of change <math>(\beta \, N - \gamma - \sigma ) \, P </math> (Eq. A1) is large and initially still increasing in spite of the decrease of <math>N</math> (Eq. A2). The algal bloom essentially takes place at the end of the green phase and the beginning of the yellow phase. The nutrient concentration decreases in the yellow phase and finally becomes so small that further growth of the algal biomass is no longer possible. At that time the algal biomass has reached its maximum and the <math>P-N</math> system enters the red phase, where the algal biomass decreases. The nutrient concentration continues its rapid decrease (cf. A2) because the uptake of nutrients by the algal population is still high. However, the algal population also declines at a fast rate because <math>(\beta \, N - \gamma - \sigma) \, P </math> (cf. A1) is large and negative. The collapse of the algal population mainly takes place in the red sector. The decrease of the nutrient concentration ends when the uptake of nutrients has become very small, because of the small size of the algal population. The <math>P-N</math> system then enters the blue phase where <math>P</math> decreases further, while <math>N</math> increases, but both at a slow rate. The algal bloom as a function of time, corresponding to the trajectory in the <math>P-N</math> phase plane, is shown in Fig. 4. It illustrates the dramatic increase and collapse of the algal biomass (5 orders of magnitude) in a short time. The peak of the bloom coincides with the strongest decrease of the nutrient concentration. The same coincidence is visible in the observation record of the plankton bloom and nutrient concentration in Fig. 2. It also appears, both in the model and the data, that the variation of the nutrient concentration is much less pronounced than the variation in the algal biomass.
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− | The nonlinearity of the algal bloom equations has implications that may appear surprising at first sight. One may notice, for instance, that complete nutrient depletion is not a necessary condition for the crash of the algal population. The point is that below a certain level, which is not necessarily very small, the nutrient concentration is insufficient to sustain a very large algal population.
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− | The maximum algal population size that can be reached during the bloom is not linearly related to the initial nutrient concentration <math>N_0</math> and the initial population size <math>P_0</math>. Depending on the values of <math>N_0, P_0</math>, it can happen that an increase of either <math>N_0</math> or <math>P_0</math> leads to a smaller bloom size, instead of a larger size<ref name=HBS></ref>. According to the model, the nutrient concentration that is reached when the population enters the yellow phase determines to a large degree the maximum population size that can be reached during the yellow phase. This feature is not visible in the observations presented in Fig. 2. In fact, other factors such as sunlight and temperature also play a role. In the case of Fig. 2, it appears that the largest blooms are correlated with low salinity values. This points to a change in the type of water masses present at the measuring site. Stratification effects (suppression of vertical mixing) may also play a role in triggering plankton blooms (Berdalet et al., 2014<ref name=Ber></ref>).
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− | When all the factors influencing the algal bloom dynamics remain constant in time, the bloom model predicts that the system will tend to the equilibrium state <math>N_{eq}, P_{eq}</math> (eq. A3), which is stable if the nutrient loss rate <math>\alpha</math> is sufficiently small. In practice, however, the temporal variation of the factors influencing the bloom dynamics prevents the establishment of an equilibrium state. When time dependency of the factors in the model equations (A1, A2) is taken into account, the multi-annual behavior of model simulations can exhibit unpredictable chaotic fluctuations (Huppert et al., 2005<ref> Huppert, A., Blasius, B., Olinky, R. and Stone, L. 2005. A Model for Seasonal Phytoplankton Blooms. Journal of Theoretical Biology 236: 276–290</ref>). In case of a seasonally fluctuating uptake efficiency <math>\beta(t)</math>, the model produces chaotic behavior if the nutrient influx <math>Q</math> is low and the mortality rate <math>\sigma</math> is large.
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− | ==Related articles==
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− | :[[Marine Plankton]]
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− | :[[Green Ocean modelling]]
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− | :[[Shelf sea exchange with the ocean]]
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− | :[[Continental Nutrient Sources and Nutrient Transformation]]
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− | :[[Which resource limits coastal phytoplankton growth/ abundance: underwater light or nutrients?]]
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− | :[[Possible consequences of eutrophication]]
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− | :[[Eutrophication in coastal environments]]
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− | :[[Threats to the coastal zone]]
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− | :[[Estuarine turbidity maximum]]
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− | :[[Differentiation of major algal groups by optical absorption signatures]]
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− | :[[Remote sensing of zooplankton]]
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− | :[[Estimation of spatial distribution of phytoplankton in the North Sea]]
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− | :[[Light fields and optics in coastal waters]]
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− | :[[The Continuous Plankton Recorder (CPR)]]
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− | :[[Diversity and classification of marine benthic algae]]
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− | :[[Functional metabolites in phytoplankton]]
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− | ==External sources==
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− | :[https://en.wikipedia.org/wiki/Phytoplankton Phytoplankton]
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− | :[https://en.wikipedia.org/wiki/Algae Algae]
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− | :[https://en.wikipedia.org/wiki/Marine_primary_production Marine primary production]
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− | ==References==
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− | <references/>
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− | [[Category:Coastal and marine ecosystems]]
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− | [[Category:Eutrophication]]
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